Archives: “Bioinformatics”

Longitudinal gut microbiome analyses and blooms of pathogenic strains during lupus disease flares

https://www.coltonconsortium.org/publications/longitudinal-gut-microbiome-analyses-and-blooms-of-pathogenic-strains-during-lupus-disease-flares/

Machine learning approach to single cell transcriptomic analysis of Sjogren’s disease reveals altered activation states of B and T lymphocytes

https://www.coltonconsortium.org/publications/machine-learning-approach-to-single-cell-transcriptomic-analysis-of-sjogrens-disease-reveals-altered-activation-states-of-b-and-t-lymphocytes/

Pediatric cerebrospinal fluid immune profiling distinguishes pediatric-onset multiple sclerosis from other pediatric-onset acute neurological disorders

https://www.coltonconsortium.org/publications/pediatric-cerebrospinal-fluid-immune-profiling-distinguishes-pediatric-onset-multiple-sclerosis-from-other-pediatric-onset-acute-neurological-disorders/

EGFR-STAT1 pathway drives fibrosis initiation in fibroinflammatory skin diseases

https://www.coltonconsortium.org/publications/egfr-stat1-pathway-drives-fibrosis-initiation-in-fibroinflammatory-skin-diseases/

ImmunoStruct enables multimodal deep learning for immunogenicity prediction

https://www.coltonconsortium.org/publications/immunostruct-enables-multimodal-deep-learning-for-immunogenicity-prediction/

A single-cell atlas of circulating immune cells over the first 2 months of age in extremely premature infants

https://www.coltonconsortium.org/publications/a-single-cell-atlas-of-circulating-immune-cells-over-the-first-2-months-of-age-in-extremely-premature-infants/

Agent-based modeling for personalized prediction of an experimental immune response to immunotherapeutic antibodies

https://www.coltonconsortium.org/publications/agent-based-modeling-for-personalized-prediction-of-an-experimental-immune-response-to-immunotherapeutic-antibodies/

An autoimmune transcriptional circuit drives FOXP3+ regulatory T cell dysfunction

https://www.coltonconsortium.org/publications/an-autoimmune-transcriptional-circuit-drives-foxp3-regulatory-t-cell-dysfunction/

Associations between blood DNA methylation and histopathologic features in lupus nephritis

https://www.coltonconsortium.org/publications/associations-between-blood-dna-methylation-and-histopathologic-features-in-lupus-nephritis/

Blood immunophenotyping identifies distinct kidney histopathology and outcomes in patients with lupus nephritis

https://www.coltonconsortium.org/publications/blood-immunophenotyping-identifies-distinct-kidney-histopathology-and-outcomes-in-patients-with-lupus-nephritis/